#!/bin/csh
#
# SGE script for MATLAB with PCT
#
# Note: A line of the form "#$ qsub_option" is interpreted by qsub
#       as if "qsub_option" was passed to qsub on the commandline.
#
## Start qsub instructions here ################################
# Set runtime (aka wallclock) limit for this job for each core,
# Format: -l h_rt=HH:MM:SS (need not specify if <= 12 hours)
#$ -l h_rt=24:00:00
#
# Invoke Parallel Environment -- only if multiprocessors are required
# There is no default value for processor count. You must provide.
#$ -pe omp 4
#
# Merge stderr into the stdout file, to reduce clutter.
#$ -j y
# Send email to your-user-name@bu.edu when job aborted or ended
#$ -m ae
# Optionally, remove leading # to send email to another address
##$ -M your-email-address

## end of qsub options ########################################

echo "\n\n********************************************"
echo "* This job runs on $HOSTNAME"
echo "********************************************\n\n"

# IMPORTANT: DONOT indent any of the below statements
matlab -nodisplay << MATLAB_ENV
% The below works like a script m-file between MATLAB_ENVs
% NSLOTS = N in -pe omp N (4 in example; qsub can override at runtime)
[s, nprocs] = unix('printenv NSLOTS');
nprocs = str2double(nprocs);
n = 2000;     % parfor i=1:n  work distributed among nprocs cores
s = myApp(n, nprocs);   % example code with parfor i=1:n with nprocs cores
exit                    % don't forget to exit MATLAB
MATLAB_ENV
# keep this line to ensure newline