Index of /examples/matlab/Tutorials/Archive/Previous/orig/batch

Name	Last modified	Size

Parent Directory		-
1	2018-09-25 14:09	551
batch.zip	2015-05-31 19:36	93K
getbev.m	2015-02-10 09:30	1.7K
isBatch.m	2015-01-06 09:32	140
mbatch	2018-09-25 11:03	95
myApp.m	2015-05-30 11:07	641
myRand.m	2018-09-25 14:07	377
pnbatch	2018-09-25 11:53	111
runBatchJob.m	2018-09-25 11:27	912
run_matlab_aj	2018-09-25 14:09	609
run_matlab_job	2018-09-25 11:04	483
run_matlab_job2	2015-03-26 08:59	611
run_matlab_pct_aj	2018-09-27 10:23	727
run_matlab_pct_job	2018-09-25 11:25	1.0K
run_matlab_task	2015-03-20 13:23	393
run_pct_jobs	2015-03-03 15:21	800
run_standalone_job	2015-05-31 19:33	1.6K
runjobs	2015-03-26 08:56	156
wnbatch	2018-09-25 11:52	80

A Collection of MATLAB Batch Scripts And Utility M-files

File Name	Description
batch.zip	zip file of current folder
README.html	this file
getbev.m	m-file to return batch environment vars
isBatch.m	whether code is running in batch
mbatch	Simple MATLAB batch script
myApp.m	Sample Application m-file
pnbatch	Partial Node Embarrassingly parallel Batch job
run_matlab_aj	MATLAB Serial Batch script for Array Job
run_matlab_job	MATLAB Serial Batch job script
run_matlab_job2	enhanced MATLAB Serial Batch job script
run_matlab_pct_aj	MATLAB PCT Batch script for Array Job
run_matlab_pct_job	MATLAB PCT Batch job script
runBatchJob.m	MATLAB m-file for more robust batch jobs
run_standalone_job	MATLAB Standalone Batch job script
runjobs	Script to submit a series of jobs via qsub
wnbatch	Whole Node Embarrassingly parallel Batch job

Where to Store Them

Either use addpath or unzip from ~/matlab (folder where startup.m resides) for access from any user folder.

Types of MATLAB Batch Jobs

Running Serial (single-core) MATLAB Batch Jobs
```
scc1$ qsub ./mbatch
```
Running Parallel (multicore) MATLAB Batch Jobs
```
scc1$ qsub -pe omp 4 ./run_matlab_pct_job
```
Running Pre-compiled MATLAB code (needs no licenses)
```
scc1$ qsub ./run_standalone_job
```
More details are available in How To Create & Run MATLAB Standalone Executable.

Running Implicitly Parallel (multithreaded) MATLAB Batch Jobs

scc1$ qsub -pe omp 12 ./wnbatch

scc1$ qsub -pe omp 7 ./pnbatch

For more details, see: Running MATLAB Batch Jobs on the SCC

Kadin Tseng, Research Computing Services, IS&T, Boston University
Created  : January, 2015
Modified : March, 2015

Note: Research Computing Services (RCS) example programs are provided "as is" without any warranty of any kind. The user assumes the entire risk of quality, performance, and repair of any defects. You are encouraged to copy and modify any of the given examples for your own use.