Index of /examples/bioinformatics/gptwosample

Icon  Name                    Last modified      Size  Description
[DIR] Parent Directory - [   ] gptwosample.qsub 15-Jul-2015 16:02 475 [DIR] input/ 15-Jul-2015 16:00 -

GPTwoSample package example


General Notes:
Default behavior attempts to use the "tk" library which requires a $DISPLAY set. If you plan
to use this application in batch mode (ie: qsub), you should change the backend to a non "tk"
library (such as PDF) using the "--backend" option.

You can choose from matplotlib backends here:

Interactive Usage:
scc4% module load python2.7
scc4% gptwosample --help
scc4% gptwosample -v -p -t -o ./output --backend PDF input/ToyCondition1.csv input/ToyCondition2.csv


Batch Usage:
scc4% qsub -P {project} gptwosample.qsub


Documentation: